ClaRNA

Doublet Group info: classifier/stacking/>>/GA/sub-001

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: >>/GA/sub-001
Members:
count: 86
download members
1VQ9:0108:0109
3GS5:C15:C16
3U5H:5704:5705
2UUA:A338:A339
1VQ5:0108:0109
1K9M:A108:A109
1Q82:A108:A109
3OHJ:A1875:A1876
3E5F:A11:A12
3G71:02109:02110
1Z79:B3:B4
1S72:02204:02205
3CCR:02204:02205
1Q86:A1271:A1272
2P7E:C15:C16
1L8V:B141:B142
1VQL:01618:01619
3CCL:0410:0411
2V3C:M27:M28
1S72:0560:0561
1M90:A2444:A2445
1VQK:01618:01619
1N8R:A1594:A1595
157D:A3:A4
3U5F:6966:6967
3CXC:02125:02126
3R8S:A1517:A1518
3CCQ:0562:0563
1VQ6:02444:02445
1S72:01618:01619
2JLZ:C1:C2
3CCL:01809:01810
1K9M:A1180:A1181
3U5D:1770:1771
3CCV:0410:0411
3G71:02125:02126
1VQL:01809:01810
1VQK:02125:02126
2QEX:02100:02101
1N8R:A1180:A1181
1VQP:02125:02126
1YJW:02125:02126
1K9M:A2125:A2126
2QEX:0815:0816
3CCV:02125:02126
3CCU:01618:01619
1GID:B88:B89
1KD1:A1809:A1810
2J01:A1749:A1750
3CCQ:01618:01619
1YIT:01740:01741
3CCM:01809:01810
1QVG:01594:01595
3U5F:61312:61313
3OXE:A83:A84
1VQP:0560:0561
3CCM:0560:0561
2VQE:A10:A11
3KNK:A1933:A1934
1VQ8:01369:01370
1YHQ:02026:02027
1YJN:0434:0435
3CCM:01072:01073
3OI1:A1141:A1142
3U5F:69:610
1VQO:02026:02027
3U5H:51603:51604
1FFK:01979:01980
1N8R:A1102:A1103
2DXI:C22:C23
3SD3:A1:A2
3OLB:K8:K9
3CCS:0980:0981
3L3C:R128:R129
1KD1:A1960:A1961
3G71:02346:02347
3R8T:A2269:A2270
3U5H:51438:51439
3CCR:02346:02347
1YJW:02346:02347
3I56:0219:0220
1MZP:B2:B3
3CME:02346:02347
2OTL:02346:02347
1Q82:A219:A220
1YJW:0219:0220
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<< 33 0.081
stacking/>> 58 0.088
stacking/>< 6 0.124
base-ribose/W_5BR 121 0.143
base-phosphate/H_9BPh 1 0.153
base-ribose/H_0BR 6 0.202
base-ribose/SW_2BR 8 0.220
base-ribose/W_3BR 2 0.280
base-ribose/W_4BR 362 0.332
base-ribose/H_7BR 4 0.336

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol