ClaRNA

Doublet Group info: classifier/stacking/>>/GA/sub-008

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: >>/GA/sub-008
Members:
count: 15
download members
2OTL:041:042
1NJI:A41:A42
1Q82:A41:A42
3OHJ:A2429:A2430
3OH7:A2429:A2430
1VQM:041:042
3CCJ:01180:01181
3R8N:A317:A318
3OHJ:A205:A206
1VQL:02581:02582
3OI1:A1875:A1876
1NJI:A2581:A2582
1KD1:A2581:A2582
3I56:02581:02582
1VQN:02581:02582
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>> 3 0.080
base-ribose/W_3BR 3 0.150
stacking/<< 8 0.172
stacking/>< 17 0.186
base-phosphate/H_9BPh 1 0.193
base-ribose/H_0BR 8 0.266
base-ribose/W_5BR 41 0.317
base-phosphate/SW_2BPh 167 0.335
base-ribose/H_7BR 4 0.336
base-ribose/W_4BR 362 0.347

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol