sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1086-A1087
X
>2VQE-A1332-A1333
X
>1FFY-T43-T44
X
>2GCS-B105-B106
X
>3EPH-E66-E67
X
>1B23-R28-R29
X
>1VQL-991-992
X
>2QA4-01253-01254
X
>3OHC-A652-A653
X
>1VQL-0527-0528
X
>3CC7-0527-0528
X
>3CCQ-0527-0528
X
>1VQ5-0527-0528
X
>3CCL-991-992
X
>1VQ6-0527-0528
X
</seq>
<hsp>
0 1:0.643266826564
0 2:0.657626589073
0 3:0.999996924496
0 4:0.880960489368
0 5:0.84754808631
0 6:0.90194115044
0 7:0.850392606194
0 8:0.692193190456
0 9:0.749408909856
0 10:0.714056576937
0 11:0.706928370635
0 12:0.645853540056
0 13:0.709265486906
0 14:0.657468478356
1 2:0.416034534615
1 3:0.559431004307
1 4:0.413821218249
1 5:0.590150833638
1 6:0.456729227966
1 7:0.523083086707
1 8:0.569951924728
1 9:0.377450442768
1 10:0.408518887476
1 11:0.332428787837
1 12:0.382663980203
1 13:0.37066625387
1 14:0.397917295809
2 3:0.491093537813
2 4:0.47519679279
2 5:0.354640836203
2 6:0.355738167253
2 7:0.285167343798
2 8:0.337294313098
2 9:0.388276788333
2 10:0.467191291404
2 11:0.407308742168
2 12:0.358260874658
2 13:0.465696092246
2 14:0.407199392014
3 4:0.336898340438
3 5:0.336851357648
3 6:0.459944335918
3 7:0.556202790552
3 8:0.594170701765
3 9:0.652100896698
3 10:0.718961467533
3 11:0.612540864393
3 12:0.657710986445
3 13:0.655512272428
3 14:0.675981578012
4 5:0.507730808666
4 6:0.494029912489
4 7:0.534919252949
4 8:0.663765798106
4 9:0.47300037848
4 10:0.508180311516
4 11:0.397690952536
4 12:0.491814684176
4 13:0.448246878408
4 14:0.4896324525
5 6:0.40660396012
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5 8:0.312347263813
5 9:0.611348111475
5 10:0.667019114966
5 11:0.582995734392
5 12:0.55566863836
5 13:0.607610745472
5 14:0.584980954009
6 7:0.232327956421
6 8:0.404051771751
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6 10:0.459236311712
6 11:0.411839098026
6 12:0.406007057377
6 13:0.456322538274
6 14:0.441937502446
7 8:0.416975900102
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7 10:0.421350475504
7 11:0.407863277511
7 12:0.37251862562
7 13:0.479476587938
7 14:0.417294000477
8 9:0.54141918166
8 10:0.583060821185
8 11:0.544814315634
8 12:0.462056804738
8 13:0.563358845421
8 14:0.501216594135
9 10:0.133101919599
9 11:0.1501064975
9 12:0.168572981714
9 13:0.240121531986
9 14:0.189767867828
10 11:0.12789890714
10 12:0.153701830475
10 13:0.182722794456
10 14:0.13356854063
11 12:0.138876745904
11 13:0.121029113918
11 14:0.121587016819
12 13:0.168802589457
12 14:0.0629139681897
13 14:0.126348680353
</hsp>