sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCJ-957-958
X
>3G71-957-958
X
>3CCU-02739-02740
X
>1NJI-B57-B58
X
>3R8S-A1982-A1983
X
>2J00-A1178-A1179
X
</seq>
<hsp>
0 1:0.28425317055
0 2:0.774358676968
0 3:0.250242097809
0 4:0.99999958505
0 5:0.620466026577
1 2:0.618261140989
1 3:0.149434971724
1 4:0.850444518876
1 5:0.526399045829
2 3:0.672496703088
2 4:0.320415829859
2 5:0.481054977136
3 4:0.896863467123
3 5:0.507306256431
4 5:0.549792285808
</hsp>