sequences=23
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CPW-01228-01229
X
>3L3C-S37-S38
X
>3U5H-53007-53008
X
>3OHK-A350-A351
X
>3OH5-A339-A340
X
>3LOA-B10-B11
X
>3KNI-A2016-A2017
X
>3OGE-A923-A924
X
>3F1F-A346-A347
X
>3OI1-A2227-A2228
X
>3OHJ-A2230-A2231
X
>1Q81-A1854-A1855
X
>3CXC-01764-01765
X
>1EXD-B61-B62
X
>3U5B-2372-2373
X
>3OHK-A2227-A2228
X
>3MUR-R30-R31
X
>1VQ4-0333-0334
X
>3L3C-S132-S133
X
>3KNK-A2341-A2342
X
>3KNH-A711-A712
X
>1Q81-A1718-A1719
X
>2QA4-01717-01718
X
</seq>
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