sequences=23
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
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</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZXU-C14-C15
X
>3PDR-A7-A8
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>1VQN-0986-0987
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>3CXC-0634-0635
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>3F2Q-X40-X41
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>2J00-A749-A750
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>3U5H-51475-51476
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>3CC4-02526-02527
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>3RW6-H51-H52
X
>1JJ2-931-932
X
>3G71-02526-02527
X
>3FO4-A61-A62
X
>3RW6-F51-F52
X
</seq>
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