sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-12580-12581
X
>2VQE-A39-A40
X
>3CD6-02335-02336
X
>3R8O-A115-A116
X
>1VQ9-02335-02336
X
>3F1E-A1111-A1112
X
>1GID-A16-A17
X
>3OH7-A140-A141
X
>3KNK-B109-B110
X
>3G71-02121-02122
X
>3KNH-A1443-A1444
X
>3R8S-A947-A948
X
>3SUH-X26-X27
X
>1FJG-A1066-A1067
X
>3CCU-0197-0198
X
>1YJ9-0197-0198
X
</seq>
<hsp>
0 1:0.225817386409
0 2:0.480810750394
0 3:0.560591628829
0 4:0.3854179476
0 5:0.573504218478
0 6:0.499135644018
0 7:0.9019485659
0 8:0.795363564695
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0 10:0.588392740224
0 11:0.589458384305
0 12:0.701612148906
0 13:0.713749522774
0 14:0.745643731064
0 15:0.827662579875
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1 3:0.461049758341
1 4:0.366313808279
1 5:0.522090194306
1 6:0.316072055927
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1 9:0.814182803994
1 10:0.416984763764
1 11:0.461666502866
1 12:0.562227161961
1 13:0.570112328784
1 14:0.567131303969
1 15:0.660605419255
2 3:0.606995142508
2 4:0.215434795593
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2 7:0.975119724648
2 8:0.931008085994
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3 4:0.427792379647
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3 8:0.645182206554
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3 10:0.520077787525
3 11:0.501279170344
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3 13:0.472490635433
3 14:0.506994246558
3 15:0.603102681188
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7 12:0.474595721172
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7 15:0.363891244607
8 9:0.375308916568
8 10:0.284112858559
8 11:0.504998818601
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8 14:0.312453696033
8 15:0.428940590242
9 10:0.463837123994
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9 13:0.422887201325
9 14:0.28084121422
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10 11:0.314515495075
10 12:0.377545145724
10 13:0.349157651835
10 14:0.226791574213
10 15:0.332240409081
11 12:0.171974634145
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11 14:0.327303782409
11 15:0.34993670412
12 13:0.21919136016
12 14:0.287372247228
12 15:0.277271669426
13 14:0.25877572133
13 15:0.316560973198
14 15:0.162151081927
</hsp>