sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A2633-A2634
X
>2UUB-A548-A549
X
>3U5B-21331-21332
X
>3KNH-A1457-A1458
X
>1YJN-0404-02285
X
>1VQ5-0358-0359
X
>3G6E-0404-02285
X
>1VQL-0404-02285
X
>1YIT-0404-02285
X
>1ZX7-F3-F4
X
>3G9C-Q67-Q68
X
>2A04-C8-C9
X
>3CCU-01059-01060
X
>1VQM-01059-01060
X
>1IVS-C47-C48
X
</seq>
<hsp>
0 1:0.43954005714
0 2:0.531416448518
0 3:0.467084116149
0 4:0.716639983221
0 5:0.457281852377
0 6:0.672831116148
0 7:0.642081732293
0 8:0.667465744191
0 9:0.654266054352
0 10:0.641294565654
0 11:0.686859757001
0 12:0.639410541844
0 13:0.599170013837
0 14:0.648793112358
1 2:0.471273543815
1 3:0.61035330969
1 4:0.764831756584
1 5:0.764424781654
1 6:0.593134138964
1 7:0.613687355597
1 8:0.689019408804
1 9:0.890160991106
1 10:0.801191084286
1 11:0.830240544216
1 12:0.63233577313
1 13:0.663166273956
1 14:0.727901630932
2 3:0.630125829514
2 4:0.999997070041
2 5:0.6558708068
2 6:0.82933125107
2 7:0.839387524116
2 8:0.908255405306
2 9:0.786491500006
2 10:0.613739303222
2 11:0.589310600785
2 12:0.448870710779
2 13:0.496313857757
2 14:0.551096211932
3 4:0.537740851924
3 5:0.540501767339
3 6:0.461600721788
3 7:0.439312410437
3 8:0.451411609752
3 9:0.55780129088
3 10:0.561789507232
3 11:0.604031702547
3 12:0.475801751507
3 13:0.432185742043
3 14:0.416084319906
4 5:0.852537482467
4 6:0.267265642905
4 7:0.215593979714
4 8:0.12755693505
4 9:0.823627852273
4 10:0.913876924025
4 11:0.994518932231
4 12:0.864979535026
4 13:0.822021224685
4 14:0.802727160527
5 6:0.844928980462
5 7:0.803223564262
5 8:0.812971610865
5 9:0.305694314857
5 10:0.357951890475
5 11:0.488787757116
5 12:0.57301822242
5 13:0.474859261843
5 14:0.515029339935
6 7:0.111561379952
6 8:0.176780349184
6 9:0.823730210166
6 10:0.844120067116
6 11:0.903524564424
6 12:0.7059679898
6 13:0.695612084573
6 14:0.685188173624
7 8:0.103335988008
7 9:0.800290603301
7 10:0.840468938479
7 11:0.915300102804
7 12:0.733919769142
7 13:0.710139661166
7 14:0.69871710888
8 9:0.797351763593
8 10:0.862493230302
8 11:0.93786396304
8 12:0.782442223955
8 13:0.74807145305
8 14:0.72922292554
9 10:0.24934131444
9 11:0.407895548075
9 12:0.523106052631
9 13:0.403593610239
9 14:0.410790075824
10 11:0.217987276558
10 12:0.336802077879
10 13:0.239399538223
10 14:0.273903647082
11 12:0.318562743764
11 13:0.271868724995
11 14:0.279514418319
12 13:0.125084673776
12 14:0.179998520841
13 14:0.118440403274
</hsp>