sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UUA-A947-A1343
X
>2VQE-A947-A1343
X
>2J02-A947-A1343
X
>2J00-A947-A1343
X
>2UUB-A947-A1343
X
>2UXC-A947-A1343
X
>2VQF-A947-A1343
X
>1FJG-A947-A1343
X
</seq>
<hsp>
0 1:0.543801214698
0 2:0.83290598614
0 3:0.807642066567
0 4:0.31710418515
0 5:0.277648403974
0 6:0.962570249958
0 7:0.725528645838
1 2:0.924289780928
1 3:0.900048769972
1 4:0.487569538695
1 5:0.391314999288
1 6:0.590401767353
1 7:0.395210537504
2 3:0.0387994642868
2 4:0.999995235276
2 5:0.736548868764
2 6:0.896696226909
2 7:0.872115557049
3 4:0.972442806555
3 5:0.709528139202
3 6:0.876491035335
3 7:0.851777036359
4 5:0.299697697599
4 6:0.942703919656
4 7:0.667624928824
5 6:0.752238310942
5 7:0.504026414106
6 7:0.566742932413
</hsp>