sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1QVG-01943-01941
X
>1YI2-01943-01941
X
>1YJN-01943-01941
X
>1VQ6-01943-01941
X
>3CME-01943-01941
X
>1Q86-A1943-A1941
X
>1K9M-A1943-A1941
X
>1JJ2-01943-01941
X
>1YIT-01943-01941
X
>1Q82-A1943-A1941
X
>1KD1-A1943-A1941
X
</seq>
<hsp>
0 1:0.666424859583
0 2:0.635360477858
0 3:0.606293830635
0 4:0.527080162653
0 5:0.81721458603
0 6:0.804595280199
0 7:0.774174038754
0 8:0.585462369827
0 9:0.607899816347
0 10:0.722884332631
1 2:0.371245690753
1 3:0.325962253832
1 4:0.92393216789
1 5:0.366857403643
1 6:0.458207241876
1 7:0.438057034729
1 8:0.263064941471
1 9:0.420030168955
1 10:0.476401166608
2 3:0.490406069671
2 4:0.781174501632
2 5:0.490128971992
2 6:0.550011119125
2 7:0.414979096309
2 8:0.196613062805
2 9:0.293127807935
2 10:0.402704513481
3 4:0.846179682908
3 5:0.404396359069
3 6:0.399996633849
3 7:0.503651577682
3 8:0.321762533551
3 9:0.422642977202
3 10:0.47746828718
4 5:1.0
4 6:0.91290152058
4 7:0.803756546906
4 8:0.794036504445
4 9:0.84900823293
4 10:0.95038053615
5 6:0.353569458226
5 7:0.493106483538
5 8:0.393582104908
5 9:0.522464191826
5 10:0.50563895937
6 7:0.376267843656
6 8:0.482827374768
6 9:0.510580606538
6 10:0.489951459463
7 8:0.441726557491
7 9:0.498376620381
7 10:0.521378659761
8 9:0.286896534328
8 10:0.403752159966
9 10:0.189238094895
</hsp>