sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YI2-0236-0234
X
>1YIJ-0236-0234
X
>1VQM-0236-0234
X
>3CPW-0236-0234
X
>3CCQ-0236-0234
X
>1S72-0236-0234
X
>1Q82-A236-A234
X
</seq>
<hsp>
0 1:0.455639933265
0 2:0.634618825466
0 3:0.642155897573
0 4:0.948113575807
0 5:0.571746505295
0 6:0.537953637282
1 2:0.420578047814
1 3:0.638011436489
1 4:0.74688632731
1 5:0.539287707995
1 6:0.785426106138
2 3:0.576563893176
2 4:0.44337595275
2 5:0.532974365797
2 6:0.847517043207
3 4:0.581895798798
3 5:0.572263242463
3 6:0.545851793456
4 5:0.748079806025
4 6:0.999989667073
5 6:0.579698616822
</hsp>