sequences=24
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3D2G-B57-B55
X
>3R8S-A2426-A2424
X
>1TRA-A34-A32
X
>3KNK-A1843-A1841
X
>3U5B-21224-21222
X
>3KNK-A2338-A2336
X
>3CCU-0243-0241
X
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X
>3R8T-A2425-A2423
X
>3U5B-2156-2154
X
>3CD6-01237-01235
X
>2OTL-0243-0241
X
>1Y39-C45-C43
X
>1VQM-0243-0241
X
>1YHQ-01879-01876
X
>1TN1-A34-A32
X
>1TN2-A34-A32
X
>3CCJ-01237-01235
X
>2QA4-01878-01875
X
>3R8N-A863-A861
X
>4TNA-A34-A32
X
>1QU3-T57-T55
X
>1QA6-D45-D43
X
>1QA6-C45-C43
X
</seq>
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