sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OI1-A246-A442
X
>3OHZ-A246-A442
X
>3U5F-61394-61391
X
>3OHK-A246-A442
X
>3F1F-A249-A449
X
>3F1H-A249-A449
X
>3OHJ-A246-A442
X
>3OH7-A246-A442
X
>3KNI-A246-A442
X
>3OH5-A246-A442
X
>2J03-A246-A442
X
>2J01-A246-A442
X
</seq>
<hsp>
0 1:0.0282854108464
0 2:0.922998717006
0 3:0.0437913513298
0 4:0.179934124962
0 5:0.185794380272
0 6:0.0514032583446
0 7:0.107338581722
0 8:0.190267040784
0 9:0.115651371728
0 10:0.139367139016
0 11:0.146058237547
1 2:0.927912891806
1 3:0.0540448806825
1 4:0.186222732513
1 5:0.192794974571
1 6:0.0519612690774
1 7:0.106928341764
1 8:0.187735630682
1 9:0.108556834003
1 10:0.150062044851
1 11:0.155898861648
2 3:0.932854093115
2 4:0.896199854995
2 5:0.895548923002
2 6:0.934004781872
2 7:0.998103594448
2 8:0.890374056447
2 9:0.999994448167
2 10:0.92500411094
2 11:0.932190349908
3 4:0.176857636907
3 5:0.182401943148
3 6:0.0282680583347
3 7:0.0934996152523
3 8:0.202033970409
3 9:0.100382205245
3 10:0.129212420319
3 11:0.136170431101
4 5:0.0130433745363
4 6:0.169290050885
4 7:0.18771457819
4 8:0.209741053661
4 9:0.192295843209
4 10:0.141974533104
4 11:0.151318756527
5 6:0.174418728419
5 7:0.192116485882
5 8:0.21818202362
5 9:0.197174634936
5 10:0.140117850253
5 11:0.149339778318
6 7:0.0837341190389
6 8:0.200318118179
6 9:0.0855646620241
6 10:0.116949130302
6 11:0.123120333042
7 8:0.204795006687
7 9:0.0355656351967
7 10:0.118744863027
7 11:0.119430855854
8 9:0.202008611565
8 10:0.221310909171
8 11:0.227133152847
9 10:0.132646041318
9 11:0.133363071742
10 11:0.0138735959592
</hsp>