sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3SKL-B48-B18
X
>3SKL-A48-A18
X
>3SKZ-B49-B19
X
>3SKZ-A49-A19
X
>3SKI-B49-B19
X
>3SKI-A49-A19
X
</seq>
<hsp>
0 1:0.57346629254
0 2:0.999996717431
0 3:0.636401569635
0 4:0.661175952676
0 5:0.627893219682
1 2:0.825774896227
1 3:0.561972911262
1 4:0.730343667407
1 5:0.730439446018
2 3:0.433309209059
2 4:0.442938988998
2 5:0.505431970812
3 4:0.245085821576
3 5:0.305646321684
4 5:0.146635738669
</hsp>