sequences=24
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3L3C-R34-R83
X
>3L3C-P34-P83
X
>3L3C-Q34-Q83
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>3G9C-Q34-Q83
X
>3G9C-R34-R83
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X
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X
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X
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X
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X
>3AKZ-F46-F6
X
>3U5H-51200-51199
X
>2NZ4-P34-P83
X
>3KNH-A447-A446
X
>2J02-V49-V6
X
>3KNH-A179-A178
X
>3KNH-A1391-A1390
X
>3L3C-S35-S34
X
>2J00-A187-A186
X
>3KNI-A660-A659
X
>2J02-A187-A186
X
>2J02-A1400-A1399
X
>1FFK-01862-01861
X
>2UXC-A996-A995
X
</seq>
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