sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3SKL-B24-B23
X
>2J01-A1567-A1566
X
>3SLM-B25-B24
X
>2J03-A1567-A1566
X
>3F1F-A1645-A1644
X
>3F1H-A1645-A1644
X
>3OH7-A1567-A1566
X
>3OH5-A1567-A1566
X
>3OI1-A1567-A1566
X
>3OHZ-A1567-A1566
X
>3OHJ-A1567-A1566
X
>3OHK-A1567-A1566
X
</seq>
<hsp>
0 1:0.978376171246
0 2:0.25366474216
0 3:0.98535131778
0 4:0.849828336382
0 5:0.85775997121
0 6:0.844243751802
0 7:0.841980090189
0 8:0.814660013389
0 9:0.801700846733
0 10:0.85299539663
0 11:0.846251892257
1 2:0.99045416492
1 3:0.0273940903843
1 4:0.332060832867
1 5:0.341279605883
1 6:0.204840978735
1 7:0.20134610808
1 8:0.223165099289
1 9:0.226135089617
1 10:0.192048269652
1 11:0.19665909944
2 3:1.0
2 4:0.895280918476
2 5:0.904693485625
2 6:0.852066557046
2 7:0.85569087601
2 8:0.836772652604
2 9:0.826895331193
2 10:0.870523653788
2 11:0.859696708515
3 4:0.335664001509
3 5:0.344315576779
3 6:0.21011938133
3 7:0.205314169704
3 8:0.225969655159
3 9:0.230029801283
3 10:0.193660562185
3 11:0.199195942448
4 5:0.0187063431261
4 6:0.220575457482
4 7:0.207992323948
4 8:0.208296002162
4 9:0.207234876465
4 10:0.246850839415
4 11:0.24367149614
5 6:0.233831217699
5 7:0.220729663685
5 8:0.219917704293
5 9:0.219209408969
5 10:0.25726733677
5 11:0.25499764025
6 7:0.0288992153217
6 8:0.070591884563
6 9:0.0835972693721
6 10:0.0987494432754
6 11:0.0786515314789
7 8:0.0562726151285
7 9:0.0693451505223
7 10:0.0833925910975
7 11:0.0656005181297
8 9:0.0251005317892
8 10:0.0746097211296
8 11:0.0672313889706
9 10:0.080718387105
9 11:0.0772188951024
10 11:0.0270991579207
</hsp>