sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGE-A34-A33
X
>3OGY-A34-A33
X
>3KNH-A34-A33
X
>2J00-A34-A33
X
>2J02-A34-A33
X
>3F1G-A451-A450
X
>3CCJ-01018-02332
X
>1VQ9-01018-02332
X
</seq>
<hsp>
0 1:0.00938498023028
0 2:0.172281705864
0 3:0.128249118403
0 4:0.130819644456
0 5:0.937666561959
0 6:0.689192587613
0 7:0.647837650961
1 2:0.169187131395
1 3:0.125149331605
1 4:0.127823532354
1 5:0.938832562491
1 6:0.689682400377
1 7:0.64896313106
2 3:0.0994150906043
2 4:0.10164612251
2 5:0.958611702346
2 6:0.633972904938
2 7:0.592778390433
3 4:0.00652860040919
3 5:0.999416906848
3 6:0.685550656748
3 7:0.64563652487
4 5:0.99999985502
4 6:0.686030211143
4 7:0.646207133486
5 6:0.819752301245
5 7:0.80994252073
6 7:0.0833162845282
</hsp>