sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHZ-A1742-A1741
X
>2J01-A1742-A1741
X
>3OHK-A1742-A1741
X
>3OH5-A1742-A1741
X
>3OHJ-A1742-A1741
X
>3F1G-A34-A33
X
>3F1E-A34-A33
X
</seq>
<hsp>
0 1:0.166443028279
0 2:0.0772709575099
0 3:0.069547643862
0 4:0.0784650084689
0 5:0.999999810618
0 6:0.999190848988
1 2:0.132641052058
1 3:0.125377964197
1 4:0.135824438828
1 5:0.967679665434
1 6:0.966863507314
2 3:0.0484707891264
2 4:0.015037879226
2 5:0.961929998284
2 6:0.961078649724
3 4:0.0468424788862
3 5:0.996565472394
3 6:0.99578422602
4 5:0.96469810207
4 6:0.963865017007
5 6:0.00700915853759
</hsp>