sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A947-A946
X
>3KNH-Y71-Y70
X
>3F1F-A1070-A1069
X
>3KNI-A1292-A1291
X
>1TTT-E23-E22
X
>1EFW-D3-D2
X
>3F1F-A884-A883
X
>3F1F-A1356-A1355
X
>3CCR-973-972
X
>2ZJR-X163-X162
X
>1FFK-028-027
X
>3F1F-A1074-A1073
X
>3KNK-A1750-A1749
X
>3F1F-A72-A71
X
>3F1H-A72-A71
X
</seq>
<hsp>
0 1:0.3955136611
0 2:0.528319421122
0 3:0.710609500436
0 4:0.554362253365
0 5:0.723376358453
0 6:0.443659905326
0 7:0.703613957759
0 8:0.540931599398
0 9:0.857308062703
0 10:0.81977658468
0 11:0.989529403164
0 12:0.830071853119
0 13:0.604644823851
0 14:0.623494482373
1 2:0.379083143615
1 3:0.738957692439
1 4:0.65007446662
1 5:0.816999387785
1 6:0.363666623431
1 7:0.73999766145
1 8:0.512405011528
1 9:0.863557463519
1 10:0.797737409627
1 11:1.0
1 12:0.835244870826
1 13:0.560993153753
1 14:0.576172951293
2 3:0.651069838468
2 4:0.546270945212
2 5:0.756884246491
2 6:0.380536409098
2 7:0.59292706133
2 8:0.448859371885
2 9:0.719247472442
2 10:0.699196384611
2 11:0.847664841677
2 12:0.732973276835
2 13:0.459006106463
2 14:0.455027950228
3 4:0.363191963393
3 5:0.324172763908
3 6:0.532170571287
3 7:0.257503216978
3 8:0.285590587554
3 9:0.300389015472
3 10:0.265907816917
3 11:0.322283318012
3 12:0.151310446652
3 13:0.352244440247
3 14:0.351272022984
4 5:0.586780667152
4 6:0.535620116153
4 7:0.408796957603
4 8:0.294165610953
4 9:0.560009415572
4 10:0.567382479373
4 11:0.624369798952
4 12:0.468887347774
4 13:0.386033923876
4 14:0.38620435923
5 6:0.575083385176
5 7:0.37700537871
5 8:0.484833301774
5 9:0.376734365621
5 10:0.335820242547
5 11:0.422705667479
5 12:0.37065407259
5 13:0.517300538261
5 14:0.52475404323
6 7:0.441293770664
6 8:0.308343137345
6 9:0.565568009585
6 10:0.515105707382
6 11:0.748629512647
6 12:0.62853598435
6 13:0.284298355195
6 14:0.30579720706
7 8:0.274504002917
7 9:0.200676693762
7 10:0.239028280022
7 11:0.373984383302
7 12:0.32720998628
7 13:0.229996008872
7 14:0.224819801676
8 9:0.414226981943
8 10:0.37647816206
8 11:0.546470548011
8 12:0.392936130996
8 13:0.141971312275
8 14:0.155618660845
9 10:0.133095603781
9 11:0.234127058207
9 12:0.278602328094
9 13:0.369284297763
9 14:0.355684882222
10 11:0.271269030323
10 12:0.250153501433
10 13:0.350595847005
10 14:0.34458764964
11 12:0.219940447278
11 13:0.545184549297
11 14:0.529565953133
12 13:0.438224544259
12 14:0.427962151082
13 14:0.040139862716
</hsp>