sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-69-61627
X
>2J00-A10-A1373
X
>2J02-A10-A1373
X
>2NZ4-F8-F7
X
>3R8O-A13-A1394
X
>2J02-A1422-A1421
X
>2NZ4-G8-G7
X
>3IQR-A14-A13
X
>1KUQ-B17-B16
X
>3R8T-A1159-A1158
X
>2ZJR-X615-X614
X
>3R8S-A1048-A1047
X
>3R8T-A2524-A2523
X
</seq>
<hsp>
0 1:0.117916778527
0 2:0.0899396600599
0 3:0.929007166078
0 4:0.0516678472666
0 5:0.78155420002
0 6:0.931346003466
0 7:0.271221721542
0 8:0.700462832863
0 9:0.0764691247356
0 10:0.119897238139
0 11:0.150535337359
0 12:0.339308148282
1 2:0.0592983023651
1 3:0.879050830346
1 4:0.105815931257
1 5:0.7167736074
1 6:0.879174948834
1 7:0.271748333204
1 8:0.641706580737
1 9:0.158277625214
1 10:0.211299685896
1 11:0.250565036181
1 12:0.428639530685
2 3:0.89499660639
2 4:0.0729952473587
2 5:0.736167730659
2 6:0.895726683843
2 7:0.252189845311
2 8:0.654844890321
2 9:0.150704921115
2 10:0.20296961779
2 11:0.225194481653
2 12:0.411051946848
3 4:0.903417153801
3 5:0.492928309052
3 6:0.0340140217812
3 7:0.726375895115
3 8:0.375328910551
3 9:0.951714167151
3 10:0.989595213987
3 11:0.947365461353
3 12:0.988202122281
4 5:0.759058120108
4 6:0.905721268694
4 7:0.246769270035
4 8:0.675133553699
4 9:0.108316191053
4 10:0.156932289745
4 11:0.169664197897
4 12:0.348471049616
5 6:0.485647482702
5 7:0.605450303766
5 8:0.389039964767
5 9:0.81637703491
5 10:0.854838098482
5 11:0.843283244744
5 12:0.934155780905
6 7:0.729263575493
6 8:0.364939460089
6 9:0.955191212797
6 10:0.993290878788
6 11:0.954117463446
6 12:0.999999809817
7 8:0.477097614127
7 9:0.32004455363
7 10:0.35216528935
7 11:0.314366539208
7 12:0.457509785578
8 9:0.736578570691
8 10:0.77425755714
8 11:0.75190632339
8 12:0.856300247469
9 10:0.0683943010432
9 11:0.120866338132
9 12:0.293794452614
10 11:0.128883535163
10 12:0.283414285105
11 12:0.203543839075
</hsp>