sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCJ-071-070
X
>1VQ9-071-070
X
>3CCV-071-070
X
>3CCE-071-070
X
>2QEX-071-070
X
>1M90-A71-A70
X
>3I56-071-070
X
>1N8R-A71-A70
X
>3CCL-071-070
X
>3G6E-071-070
X
>1YJN-071-070
X
>3G71-071-070
X
</seq>
<hsp>
0 1:0.794405473485
0 2:0.78246912771
0 3:0.476267868101
0 4:0.675811920859
0 5:0.721870258251
0 6:0.695864068098
0 7:0.457909224287
0 8:0.588999748775
0 9:0.609708932305
0 10:0.557098906922
0 11:0.732898921423
1 2:0.649617258241
1 3:0.512626603519
1 4:0.617396567681
1 5:0.375654863456
1 6:0.628403789544
1 7:0.535716255406
1 8:0.578005873712
1 9:0.356805333601
1 10:0.588581894478
1 11:0.576846685015
2 3:0.372067838646
2 4:0.65457158341
2 5:0.439933604847
2 6:0.961184841066
2 7:0.51455478276
2 8:0.37811785808
2 9:0.812856569031
2 10:0.819525782681
2 11:1.0
3 4:0.411236783985
3 5:0.356055798575
3 6:0.660424857624
3 7:0.322298200375
3 8:0.246242249461
3 9:0.526544632383
3 10:0.51110133287
3 11:0.723061220515
4 5:0.44860877265
4 6:0.507548716388
4 7:0.521348597024
4 8:0.469812526882
4 9:0.530059009438
4 10:0.431187632682
4 11:0.650579703522
5 6:0.711265640251
5 7:0.350030544315
5 8:0.30838190271
5 9:0.482249940204
5 10:0.50494069544
5 11:0.633877513345
6 7:0.69554821983
6 8:0.81284055447
6 9:0.42103443008
6 10:0.491773753608
6 11:0.480100175934
7 8:0.346135039858
7 9:0.477017056645
7 10:0.504002277478
7 11:0.651681912639
8 9:0.604642145501
8 10:0.534433804868
8 11:0.769185294411
9 10:0.360269882944
9 11:0.334357307442
10 11:0.314726203139
</hsp>