sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1F-A1351-A1350
X
>3U5B-2389-21713
X
>3OH5-A1281-A1280
X
>3F1H-A1351-A1350
X
>3KFU-N24-N23
X
>3KFU-M24-M23
X
>3OH7-A1281-A1280
X
>3OHJ-A1281-A1280
X
>3U5F-6386-61725
X
>3OHK-A1281-A1280
X
>3KNK-A792-A791
X
>3U5D-12650-12649
X
</seq>
<hsp>
0 1:0.330023609371
0 2:0.0520299950461
0 3:0.00499639615584
0 4:0.904462009437
0 5:0.905353320499
0 6:0.0511545367525
0 7:0.0668330396943
0 8:0.336540740332
0 9:0.0626932876453
0 10:0.360480543114
0 11:0.280846236183
1 2:0.308650540637
1 3:0.328145403743
1 4:0.992303870154
1 5:0.993531460796
1 6:0.304663168771
1 7:0.310855436062
1 8:0.0247363336906
1 9:0.307653020086
1 10:0.396735328353
1 11:0.315007690948
2 3:0.0507400439706
2 4:0.912788687978
2 5:0.913650848294
2 6:0.00884022664532
2 7:0.0362914913085
2 8:0.315886055352
2 9:0.0356644585016
2 10:0.375617428658
2 11:0.257593426319
3 4:0.905021684593
3 5:0.90595761176
3 6:0.0500510924577
3 7:0.066745825466
3 8:0.334709939274
3 9:0.0626471982234
3 10:0.3571574791
3 11:0.282035998811
4 5:0.00220872471146
4 6:0.91544476644
4 7:0.910855573093
4 8:0.998758117142
4 9:0.913815507736
4 10:0.738927405199
4 11:0.992618827607
5 6:0.916320006528
5 7:0.911544682543
5 8:0.999999693396
5 9:0.914548859796
5 10:0.740150288905
5 11:0.993253599795
6 7:0.0361013104127
6 8:0.311753351646
6 9:0.033205871818
6 10:0.376557480828
6 11:0.255674894209
7 8:0.317334019416
7 9:0.0113005874286
7 10:0.398048749533
7 11:0.232371814497
8 9:0.313745328774
8 10:0.403517738902
8 11:0.315464526406
9 10:0.394990151386
9 11:0.234287135006
10 11:0.556866993358
</hsp>