sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-61034-61033
X
>1C0A-B22-B21
X
>3IVN-B34-B7
X
>3U5F-61787-61785
X
>3U5B-21775-21773
X
>3U5B-21365-21364
X
>3U5D-364-362
X
>3R8N-A13-A1394
X
>3OGY-A10-A1373
X
>3F1G-A10-A1373
X
>3OHC-A10-A1373
X
>3OHD-A10-A1373
X
</seq>
<hsp>
0 1:0.999997939908
0 2:0.228770561067
0 3:0.158838695104
0 4:0.1854656619
0 5:0.235812528245
0 6:0.149012128492
0 7:0.441528099359
0 8:0.450153622026
0 9:0.418201374894
0 10:0.485175038969
0 11:0.488727749814
1 2:0.856757869544
1 3:0.95448522148
1 4:0.965687721634
1 5:0.810960715027
1 6:0.985597889311
1 7:0.649534447886
1 8:0.676910790417
1 9:0.692756513872
1 10:0.628195113928
1 11:0.626495893158
2 3:0.228309013596
2 4:0.262426081698
2 5:0.194935930581
2 6:0.249846392708
2 7:0.358878614061
2 8:0.367811905101
2 9:0.364224917639
2 10:0.429275574343
2 11:0.430761780785
3 4:0.0609226143013
3 5:0.288502647007
3 6:0.208020700215
3 7:0.439721875771
3 8:0.44770673965
3 9:0.398029166496
3 10:0.473384170136
3 11:0.475348831513
4 5:0.325907961013
4 6:0.250865675897
4 7:0.473775276579
4 8:0.486709587792
4 9:0.432993364645
4 10:0.502081044165
4 11:0.504448983575
5 6:0.214740081974
5 7:0.230461538802
5 8:0.244102751348
5 9:0.244520889776
5 10:0.296470472637
5 11:0.299781844903
6 7:0.376521531759
6 8:0.375367116707
6 9:0.357273953771
6 10:0.439905189486
6 11:0.441830506337
7 8:0.0630631826637
7 9:0.116060253189
7 10:0.137459760983
7 11:0.135715615859
8 9:0.103443759119
8 10:0.146491268399
8 11:0.142268544139
9 10:0.105202185151
9 11:0.10211875709
10 11:0.0109382645738
</hsp>