sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZJR-X554-X553
X
>2QA4-01880-01879
X
>3OH5-A2493-A2492
X
>3OH7-A2493-A2492
X
>3OI1-A2493-A2492
X
>3OHZ-A2493-A2492
X
>3OHK-A2493-A2492
X
>3OHJ-A2493-A2492
X
</seq>
<hsp>
0 1:0.579056688052
0 2:0.970078119371
0 3:0.971693919073
0 4:1.0
0 5:0.999262638772
0 6:0.960274265349
0 7:0.959436214029
1 2:0.584694370245
1 3:0.587395053969
1 4:0.620902653056
1 5:0.618420340105
1 6:0.587977074933
1 7:0.586366598763
2 3:0.00375943259436
2 4:0.0563815037306
2 5:0.0551688995733
2 6:0.0466693319736
2 7:0.0466346937732
3 4:0.0537965504124
3 5:0.0527362128329
3 6:0.045459201226
3 7:0.0455675588014
4 5:0.00457469998607
4 6:0.0630173273631
4 7:0.0634086765883
5 6:0.0631321311299
5 7:0.0634389134205
6 7:0.00414445769656
</hsp>