ClaRNA

Doublet Group info: classifier/base-ribose/H_0BR/GC/sub-003

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-ribose
Desc: H_0BR/GC/sub-003
Members:
count: 55
download members
3CCV:02048:02377
2OTJ:02048:02377
1VQK:02048:02377
3CCL:02048:02377
3G71:02048:02377
3CCR:02048:02377
3CD6:02048:02377
1VQO:02048:02377
1YJW:02048:02377
3CMA:02048:02377
3R8T:A2053:A2493
2ZJR:X1926:X2288
3CXC:02048:02377
1VQN:02048:02377
1YIT:02048:02377
3G6E:02048:02377
1N8R:A2048:A2377
2QEX:02048:02377
1Q82:A2048:A2377
2J03:A1977:A2378
1YI2:02048:02377
3I56:02048:02377
2J01:A1977:A2378
1YJ9:02048:02377
3U5D:12210:12622
1VQ8:02048:02377
1VQ4:02048:02377
3CC4:02048:02377
3CC7:02048:02377
1QVG:02048:02377
1VQ9:02048:02377
1YIJ:02048:02377
2OTL:02048:02377
1YHQ:02048:02377
1VQP:02048:02377
1NJI:A2048:A2377
1YJN:02048:02377
1VQL:02048:02377
1Q81:A2048:A2377
1VQM:02048:02377
1VQ7:02048:02377
1S72:02048:02377
3OH7:A1977:A2331
1VQ5:02048:02377
3CPW:02048:02377
1VQ6:02048:02377
1M90:A2048:A2377
3OH5:A1977:A2331
1JJ2:02048:02377
1KD1:A2048:A2377
1K9M:A2048:A2377
3CC2:02048:02377
1K8A:A2048:A2377
1Q86:A2048:A2377
1FFK:02001:02330
Closest classifer groups: show all      show selected
Group Members RMSD
base-phosphate/H_0BPh 5 0.563
base-ribose/H_7BR 16 0.637
base-phosphate/S_1BPh 4 0.760
base-phosphate/H_7BPh 1 0.850
base-ribose/H_0BR 3 1.068
base-ribose/W_5BR 7 1.093
bp/HS_cis 2 1.104
bp/SH_cis 3 1.104
base-phosphate/W_3BPh 1 1.171
stacking/>> 4 1.315

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol