sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CME-02602-02601
X
>3KNH-A548-A547
X
>3KNK-A154-A153
X
>2ZJR-X1794-X1790
X
>3KNI-A2077-A2076
X
>3R8T-A1086-A1085
X
>2J02-W62-W61
X
>3KNK-A673-A672
X
>2FMT-D70-D69
X
>2DU4-C27-C26
X
>2FMT-C70-C69
X
>3KNK-A2421-A2420
X
>3KNK-A2349-A2348
X
>2CSX-C70-C69
X
</seq>
<hsp>
0 1:0.763548703951
0 2:0.697818653172
0 3:0.507739822328
0 4:0.69384021223
0 5:0.820873153551
0 6:0.727955768182
0 7:0.733909121521
0 8:0.645811594369
0 9:0.77062901178
0 10:0.666601213298
0 11:0.762140087648
0 12:0.763466978872
0 13:0.716663472375
1 2:0.233479719541
1 3:0.916852567916
1 4:0.173453230376
1 5:0.338076839117
1 6:0.188107533395
1 7:0.186257641463
1 8:0.211046552707
1 9:0.170945294276
1 10:0.193638376437
1 11:0.196547849304
1 12:0.163253837247
1 13:0.11390089663
2 3:0.884077698325
2 4:0.137164719374
2 5:0.341826704813
2 6:0.213300510369
2 7:0.187845256597
2 8:0.237298044674
2 9:0.181916427907
2 10:0.219274752728
2 11:0.126152709262
2 12:0.173825137904
2 13:0.174630561351
3 4:0.865869455418
3 5:1.0
3 6:0.864151705466
3 7:0.884402310994
3 8:0.812731304977
3 9:0.908605931651
3 10:0.828232571139
3 11:0.918751832844
3 12:0.940807041509
3 13:0.88061836289
4 5:0.392203833346
4 6:0.107802662976
4 7:0.0943292020377
4 8:0.130859514517
4 9:0.117893182637
4 10:0.110321449555
4 11:0.120127156818
4 12:0.17915300618
4 13:0.0765356254947
5 6:0.454903493191
5 7:0.420995650861
5 8:0.472005896744
5 9:0.39596192167
5 10:0.453851892585
5 11:0.362961328117
5 12:0.240953344426
5 13:0.37320523572
6 7:0.0491958262955
6 8:0.0946607998251
6 9:0.0862498320496
6 10:0.0695560475724
6 11:0.13799925992
6 12:0.222642709542
6 13:0.0933050842484
7 8:0.119089783756
7 9:0.0576863439459
7 10:0.0906875199259
7 11:0.100759073142
7 12:0.18627622857
7 13:0.0831111116259
8 9:0.163887408438
8 10:0.029903515308
8 11:0.199975569251
8 12:0.256326661846
8 13:0.122688831776
9 10:0.134922062998
9 11:0.0711245765584
9 12:0.159815399748
9 13:0.0911210504248
10 11:0.172785950475
10 12:0.232859392077
10 13:0.0983995543051
11 12:0.136595492826
11 13:0.121220001599
12 13:0.149762929699
</hsp>