sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5B-21699-21698
X
>3R8O-A1140-A1139
X
>3EGZ-B20-B19
X
>3R8N-A1140-A1139
X
>3U5D-1240-1239
X
>3LWR-E7-E6
X
>1T0E-A12-A11
X
</seq>
<hsp>
0 1:0.257572365721
0 2:0.94669265708
0 3:0.267102123101
0 4:0.2031085415
0 5:0.435892624539
0 6:0.335627824943
1 2:0.99999975458
1 3:0.164384901687
1 4:0.210137646162
1 5:0.394368046502
1 6:0.354677959202
2 3:0.964310821756
2 4:0.868025208102
2 5:0.716386781048
2 6:0.697467685957
3 4:0.163219715306
3 5:0.32729098195
3 6:0.302013010114
4 5:0.252356795653
4 6:0.210787245098
5 6:0.197640132202
</hsp>