sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A2793-A2792
X
>3R8T-A1411-A1410
X
>3OHZ-A1425-A1424
X
>3R8N-A1351-A1350
X
>3KNK-A2532-A2531
X
>3R8T-A1867-A1866
X
>2J00-V26-V25
X
</seq>
<hsp>
0 1:0.450234623765
0 2:0.846455479633
0 3:1.0
0 4:0.739409429034
0 5:0.345295388384
0 6:0.413431489976
1 2:0.540911768479
1 3:0.633453537129
1 4:0.39186209008
1 5:0.303590885969
1 6:0.157195546534
2 3:0.26891960519
2 4:0.36914832478
2 5:0.589589773652
2 6:0.475733431166
3 4:0.335167490305
3 5:0.721962911711
3 6:0.609829054285
4 5:0.47559009274
4 6:0.377208141122
5 6:0.219663620258
</hsp>