ClaRNA

Doublet Group info: classifier/base-ribose/H_0BR/GU/sub-006

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-ribose
Desc: H_0BR/GU/sub-006
Members:
count: 36
download members
1YFG:A41:A40
1VQ9:01499:01498
3CCL:01499:01498
3CPW:01499:01498
1GID:A55:A54
1VQK:01499:01498
3G6E:01499:01498
1VQL:01499:01498
1VQP:01499:01498
3CXC:01809:01808
3OGE:A719:A718
3OGY:A719:A718
3CXC:01499:01498
3KNI:A396:A395
3F1F:A788:A787
3KNK:A567:A566
3R8N:A739:A738
3KFU:M61:M60
2UUB:A994:A993
1G59:D65:D64
2OTL:01499:01498
1YJN:01499:01498
2J03:A2712:A2711
2J01:A2712:A2711
2J02:A1495:A1494
3F1H:A1125:A1124
3F1F:A1125:A1124
3OHC:A923:A922
2ZJR:X1059:X1058
2J00:A1285:A1284
3OHD:A605:A604
1IL2:D39:D38
1FJG:A994:A993
2J01:B112:B111
2J03:B112:B111
2FK6:R46:R45
Closest classifer groups: show all      show selected
Group Members RMSD
base-ribose/H_0BR 3 0.191
stacking/>> 1 0.259
base-ribose/H_7BR 1 0.282
bp/WH_tran 30 0.364
bp/HW_tran 17 0.388
stacking/<< 12 0.453
stacking/<> 7 0.467
bp/WH_cis 8 0.564
base-phosphate/W_4BPh 18 0.568
base-phosphate/W_5BPh 5 0.638

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol