sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3B4C-B45-B44
X
>2J01-A1124-A1123
X
>2J03-A1124-A1123
X
>3OHZ-A1124-A1123
X
>3OHK-A1124-A1123
X
>3OH7-A1124-A1123
X
>3OH5-A1124-A1123
X
</seq>
<hsp>
0 1:0.999997820435
0 2:0.99980698832
0 3:0.948446147457
0 4:0.968784870129
0 5:0.970166946476
0 6:0.968061202706
1 2:0.00174006689186
1 3:0.202183717128
1 4:0.20016594077
1 5:0.211610560368
1 6:0.212617464611
2 3:0.201927631735
2 4:0.199905848732
2 5:0.211508444666
2 6:0.212504046185
3 4:0.0569172913196
3 5:0.0408316138547
3 6:0.0403073581503
4 5:0.0437635691295
4 6:0.0434429257918
5 6:0.00306575304445
</hsp>