sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J03-A1562-A1561
X
>2QA4-01654-01653
X
>3OH7-A1562-A1561
X
>3OH5-A1562-A1561
X
>3OI1-A1562-A1561
X
>3OHK-A1562-A1561
X
>3OHJ-A1562-A1561
X
</seq>
<hsp>
0 1:0.770688636274
0 2:0.621646612288
0 3:0.475538792871
0 4:0.371367552901
0 5:0.36163239372
0 6:0.266354001125
1 2:0.999999798702
1 3:0.923340035486
1 4:0.95559677926
1 5:0.816148554056
1 6:0.751263139644
2 3:0.196279987103
2 4:0.358560514372
2 5:0.281772205567
2 6:0.393558082132
3 4:0.274793373875
3 5:0.188467666132
3 6:0.255111302946
4 5:0.24428263185
4 6:0.257713350133
5 6:0.150544996541
</hsp>