sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J02-A1274-A1215
X
>2J00-A1274-A1215
X
>3U5H-51142-51251
X
>3OHC-A1274-A1215
X
>3OHD-A1274-A1215
X
>2VQF-A1274-A1215
X
>2VQE-A1274-A1215
X
>2UUA-A1274-A1215
X
>1XMQ-A1269-A1210
X
>2UXC-A1274-A1215
X
>2UUB-A1274-A1215
X
>1N32-A1274-A1215
X
>1FJG-A1274-A1215
X
</seq>
<hsp>
0 1:0.00436159958764
0 2:0.932505670063
0 3:0.0824222373688
0 4:0.0830695330189
0 5:0.0835534286805
0 6:0.0792438432262
0 7:0.0646303794588
0 8:0.0688284125003
0 9:0.0667933062155
0 10:0.0682510195639
0 11:0.076341046396
0 12:0.0923755636667
1 2:0.930855026034
1 3:0.0846545795787
1 4:0.0853201518829
1 5:0.0869031497381
1 6:0.0817187276617
1 7:0.0679634654974
1 8:0.0701480614754
1 9:0.0697394735242
1 10:0.0703391920496
1 11:0.0783512879474
1 12:0.0947715824559
2 3:0.95387633637
2 4:0.951938343644
2 5:0.991818566856
2 6:0.992251425988
2 7:0.971401714512
2 8:0.953979018121
2 9:0.969929710346
2 10:0.975905062864
2 11:0.981142166196
2 12:0.999999901065
3 4:0.00397797866388
3 5:0.0694555375786
3 6:0.102200837854
3 7:0.0625355740769
3 8:0.11470019248
3 9:0.072460948495
3 10:0.106949199336
3 11:0.113109368411
3 12:0.118537480391
4 5:0.07027122141
4 6:0.103156698296
4 7:0.0626940791592
4 8:0.114504485347
4 9:0.0725488522046
4 10:0.107638301646
4 11:0.113762756775
4 12:0.119485251933
5 6:0.0440166029689
5 7:0.0258288908814
5 8:0.08205331475
5 9:0.0418165258013
5 10:0.0623945510788
5 11:0.0646571388131
5 12:0.0597452628373
6 7:0.0446743175111
6 8:0.0556676401303
6 9:0.0468785463614
6 10:0.0306868490616
6 11:0.0277585925432
6 12:0.0238666240865
7 8:0.0634844094247
7 9:0.0231047507441
7 10:0.0512810089103
7 11:0.0562900949365
7 12:0.0606710003021
8 9:0.0520394185693
8 10:0.0343167689583
8 11:0.0351650008562
8 12:0.057260357706
9 10:0.0424842090555
9 11:0.048919074278
9 12:0.0554058354967
10 11:0.0191042918155
10 12:0.0298419286376
11 12:0.0266994536747
</hsp>