sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A1616-A1909
X
>3OHK-A1616-A1909
X
>2ZJR-X1594-X1858
X
>3OH5-A1616-A1909
X
>3OHJ-A1616-A1909
X
>3OI1-A1616-A1909
X
>3OHZ-A1616-A1909
X
>3F1F-A1694-A1987
X
>3F1H-A1694-A1987
X
>3R8T-A1668-A1985
X
>2J03-A1616-A1909
X
>2J01-A1616-A1909
X
</seq>
<hsp>
0 1:0.524502334669
0 2:0.545799311843
0 3:0.0894889235718
0 4:0.506558683493
0 5:0.296450070136
0 6:0.300242914846
0 7:0.539641909724
0 8:0.537088333837
0 9:0.717683210836
0 10:0.755846642435
0 11:0.780879977751
1 2:0.609785922638
1 3:0.542814412292
1 4:0.0940420494818
1 5:0.448679362872
1 6:0.502445047461
1 7:0.4254767826
1 8:0.435540594414
1 9:1.0
1 10:0.750144346033
1 11:0.78205166056
2 3:0.557023162803
2 4:0.622628321251
2 5:0.579614724404
2 6:0.601112511016
2 7:0.506422232178
2 8:0.489877050568
2 9:0.768811818411
2 10:0.759335256459
2 11:0.804863894281
3 4:0.516788700896
3 5:0.283541950138
3 6:0.272483478184
3 7:0.562085697136
3 8:0.554845301132
3 9:0.686774839819
3 10:0.726309337254
3 11:0.749960031481
4 5:0.429027972538
4 6:0.475993519761
4 7:0.438040382907
4 8:0.442020594246
4 9:0.968429093063
4 10:0.731398906583
4 11:0.762057612616
5 6:0.0793457260118
5 7:0.417314227809
5 8:0.412518137501
5 9:0.671226035914
5 10:0.495489351101
5 11:0.519527585628
6 7:0.460803571999
6 8:0.45421563538
6 9:0.648069618837
6 10:0.493882090165
6 11:0.51567555006
7 8:0.0770491581959
7 9:0.771570081152
7 10:0.597915784746
7 11:0.644290160574
8 9:0.728273956726
8 10:0.57696187068
8 11:0.625605218757
9 10:0.674263516957
9 11:0.697084054775
10 11:0.0705506560302
</hsp>