sequences=18
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-5522-5468
X
>3U5D-1516-1462
X
>3OWZ-B65-B26
X
>3OWZ-A70-A31
X
>3OWI-B70-B31
X
>3OXM-A70-A31
X
>3OWW-A70-A31
X
>3OWW-B69-B30
X
>3OWI-A70-A31
X
>3OXD-A70-A31
X
>3OXE-A70-A31
X
>3OXE-B70-B31
X
>3OXM-B70-B31
X
>3OXB-B69-B30
X
>3OXD-B69-B30
X
>3OXB-A70-A31
X
>3OI1-A1049-A1056
X
>3OHZ-A1049-A1056
X
</seq>
<hsp>
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0 2:0.338550178918
0 3:0.30194789946
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0 5:0.37013211197
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16 17:0.0165980682106
</hsp>