sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-6169-6138
X
>3U5B-2406-2389
X
>3U5F-6403-6386
X
>420D-A10-B5
X
>3CCR-02249-02220
X
>3CD6-02249-02220
X
>420D-B10-A5
X
>3CCS-02249-02220
X
>3CCJ-02249-02220
X
</seq>
<hsp>
0 1:0.662866224935
0 2:0.88830194927
0 3:0.636304727793
0 4:0.819461099788
0 5:0.935647219496
0 6:0.718350310062
0 7:0.785177265279
0 8:0.999993422848
1 2:0.386916058443
1 3:0.359940727934
1 4:0.654931378299
1 5:0.58502026162
1 6:0.418064778308
1 7:0.529041142724
1 8:0.643308472484
2 3:0.376766691519
2 4:0.613243745378
2 5:0.517459295232
2 6:0.320365881787
2 7:0.538824490481
2 8:0.522586868107
3 4:0.47813730018
3 5:0.457049329522
3 6:0.164910837128
3 7:0.444879091321
3 8:0.576145973269
4 5:0.271055939839
4 6:0.419508431429
4 7:0.201562644089
4 8:0.360994742943
5 6:0.403775210743
5 7:0.240562936198
5 8:0.284775286117
6 7:0.391046200163
6 8:0.511239217513
7 8:0.293403637688
</hsp>