sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1G-A682-A667
X
>3R8O-A261-A231
X
>3F1G-A1167-A1046
X
>3F1E-A1167-A1046
X
>3OHD-A682-A667
X
>3CCR-088-072
X
>3OHY-A682-A667
X
>2VQF-A682-A667
X
>3KNH-A263-A229
X
>2UUB-A1167-A1046
X
>1KXK-A66-A6
X
>2J02-A1167-A1046
X
>2J00-A1167-A1046
X
>3F1F-A8-A2039
X
</seq>
<hsp>
0 1:0.633235983669
0 2:0.345412864733
0 3:0.341027767977
0 4:0.248959498541
0 5:0.256269427482
0 6:0.257730554235
0 7:0.222658899432
0 8:0.487741939866
0 9:0.455503477227
0 10:0.308432620986
0 11:0.355106716815
0 12:0.348490469971
0 13:0.352493387044
1 2:0.862982094042
1 3:0.858384969163
1 4:0.615426906416
1 5:0.541215733548
1 6:0.515004873098
1 7:0.587924248039
1 8:0.999999152246
1 9:0.932323770816
1 10:0.541393670039
1 11:0.838765045644
1 12:0.828601619159
1 13:0.559463246409
2 3:0.0133161685477
2 4:0.498905697991
2 5:0.460325081412
2 6:0.559301352194
2 7:0.399861056997
2 8:0.200188106525
2 9:0.242164440071
2 10:0.425206437999
2 11:0.190572373315
2 12:0.191656723075
2 13:0.567715462279
3 4:0.492117590329
3 5:0.450956001502
3 6:0.555433826791
3 7:0.391476602635
3 8:0.200360870143
3 9:0.236274109037
3 10:0.415812546802
3 11:0.18835683499
3 12:0.189217822751
3 13:0.561697955238
4 5:0.262411171889
4 6:0.224787044142
4 7:0.170073194467
4 8:0.656473313432
4 9:0.613493111034
4 10:0.32978967331
4 11:0.538077164119
4 12:0.529677188003
4 13:0.28206915555
5 6:0.329299156252
5 7:0.160205105498
5 8:0.574151181835
5 9:0.488812215845
5 10:0.123383818636
5 11:0.441501958977
5 12:0.433148672015
5 13:0.317525851988
6 7:0.286889344424
6 8:0.717810104065
6 9:0.682883944066
6 10:0.393388130688
6 11:0.550967936004
6 12:0.541547348216
6 13:0.217967514353
7 8:0.548119376443
7 9:0.489811103529
7 10:0.184848659984
7 11:0.426886177907
7 12:0.416914474678
7 13:0.285450976531
8 9:0.138747857017
8 10:0.54037894394
8 11:0.220546708503
8 12:0.228888003281
8 13:0.71177257097
9 10:0.453639010193
9 11:0.213447689724
9 12:0.217596320349
9 13:0.664734121899
10 11:0.411506451942
10 12:0.402570091892
10 13:0.350296194361
11 12:0.0164718318838
11 13:0.530083827615
12 13:0.520086281383
</hsp>