sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3G71-0423-0223
X
>2QEX-0423-0223
X
>2J01-A443-A245
X
>1KD1-A423-A223
X
>1JJ2-0423-0223
X
>1S72-0423-0223
X
>1YHQ-0423-0223
X
>1N8R-A423-A223
X
>3OH5-A443-A245
X
>3OH7-A443-A245
X
>3OHZ-A443-A245
X
>3OI1-A443-A245
X
</seq>
<hsp>
0 1:0.199645369493
0 2:0.793534811039
0 3:0.406923082663
0 4:0.413718815404
0 5:0.407799050995
0 6:0.217082010435
0 7:0.369959883883
0 8:0.706989805051
0 9:0.705888528673
0 10:0.676516621746
0 11:0.656843906142
1 2:0.76834770687
1 3:0.282134164842
1 4:0.287510519574
1 5:0.282232983695
1 6:0.203938108221
1 7:0.251896225394
1 8:0.64256955028
1 9:0.654076797403
1 10:0.559393440027
1 11:0.544464579548
2 3:0.934829448815
2 4:0.997546191453
2 5:0.999989175404
2 6:0.749175020172
2 7:0.942619502224
2 8:0.329490210969
2 9:0.307903374256
2 10:0.477059168577
2 11:0.454880986472
3 4:0.118052108963
3 5:0.13580798858
3 6:0.3131574645
3 7:0.0878340351643
3 8:0.841063544543
3 9:0.854157090581
3 10:0.656224533781
3 11:0.648838666968
4 5:0.0238645767863
4 6:0.36262999884
4 7:0.0997539892997
4 8:0.873240495732
4 9:0.890116178167
4 10:0.708397230189
4 11:0.703549205505
5 6:0.362498274021
5 7:0.114653251792
5 8:0.869801902208
5 9:0.886889998329
5 10:0.709413178471
5 11:0.705250671352
6 7:0.307541656364
6 8:0.673287158175
6 9:0.666867251031
6 10:0.552970261733
6 11:0.534735617415
7 8:0.842010227707
7 9:0.85520520622
7 10:0.677698536706
7 11:0.665527042744
8 9:0.0696154075153
8 10:0.340543129539
8 11:0.335156934671
9 10:0.3505630227
9 11:0.339887525181
10 11:0.0759537820839
</hsp>