sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YJ9-01769-02591
X
>1VQ6-01769-02591
X
>1VQ7-01769-02591
X
>1YIJ-01769-02591
X
>3CCR-01769-02591
X
>3CXC-01769-02591
X
>1VQ5-01769-02591
X
>1N32-A872-A748
X
>1VQO-01769-02591
X
>3OHC-A872-A748
X
>3OHD-A872-A748
X
</seq>
<hsp>
0 1:0.375616282194
0 2:0.394840097828
0 3:0.50523969746
0 4:0.496857041805
0 5:0.249506619212
0 6:0.429145845356
0 7:0.737283404878
0 8:0.442919326586
0 9:0.780613563332
0 10:0.761912384456
1 2:0.12124310117
1 3:0.252726281452
1 4:0.189119420869
1 5:0.297443985491
1 6:0.159635101266
1 7:0.856283759456
1 8:0.416083501832
1 9:0.88052971783
1 10:0.863342345649
2 3:0.255019834751
2 4:0.125789230967
2 5:0.353781049008
2 6:0.152281389029
2 7:0.895022362895
2 8:0.480621452004
2 9:0.928095961101
2 10:0.90971400639
3 4:0.235864035889
3 5:0.346133458025
3 6:0.115535599137
3 7:0.815025148451
3 8:0.460242201923
3 9:0.849329166863
3 10:0.83332874202
4 5:0.436541118078
4 6:0.168488883915
4 7:0.969430732517
4 8:0.528134770587
4 9:1.0
4 10:0.9821882265
5 6:0.303364256017
5 7:0.625732520728
5 8:0.29556313338
5 9:0.650987613781
5 10:0.633904618412
6 7:0.822566840356
6 8:0.426316348595
6 9:0.851569224854
6 10:0.833949314063
7 8:0.799618198994
7 9:0.241505529526
7 10:0.229647262509
8 9:0.745049152349
8 10:0.733979488015
9 10:0.0448918015917
</hsp>