sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2A43-A21-A11
X
>3U5B-2738-2380
X
>3R8S-B57-B29
X
>3Q50-A28-A15
X
>3OGY-A1144-A1075
X
>3OI0-A1144-A1075
X
>3OHC-A1144-A1075
X
>2J02-A1144-A1075
X
>2J00-A1144-A1075
X
</seq>
<hsp>
0 1:0.249004728308
0 2:0.527576252618
0 3:0.191122307286
0 4:0.758808570916
0 5:0.65445910757
0 6:0.606217004222
0 7:0.875919321625
0 8:0.877389935112
1 2:0.54188353748
1 3:0.161410158073
1 4:0.795303673709
1 5:0.708671275867
1 6:0.677674767396
1 7:0.997832089173
1 8:0.999997794509
2 3:0.508257195188
2 4:0.565062125548
2 5:0.5494652884
2 6:0.553295616046
2 7:0.958684572255
2 8:0.955794952822
3 4:0.740924278032
3 5:0.65755845739
3 6:0.623687160283
3 7:0.912240530898
3 8:0.913884498106
4 5:0.149929824251
4 6:0.217178616522
4 7:0.543944203943
4 8:0.540155483246
5 6:0.0739020922812
5 7:0.486332827537
5 8:0.484018822535
6 7:0.455487739586
6 8:0.453719806784
7 8:0.0112432347276
</hsp>