sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UXC-A1351-A912
X
>3F1G-A1144-A1075
X
>3F1E-A1144-A1075
X
>3F1G-A1351-A912
X
>1N32-A1351-A912
X
>2VQF-A1144-A1075
X
>2UXC-A1144-A1075
X
</seq>
<hsp>
0 1:0.600766298403
0 2:0.605194917653
0 3:0.524275782992
0 4:0.256717768738
0 5:0.562868908089
0 6:0.616551307021
1 2:0.0181538496411
1 3:0.997813533873
1 4:0.756238690976
1 5:0.270652733999
1 6:0.369247672258
2 3:1.0
2 4:0.758470876623
2 5:0.263576643502
2 6:0.359796387186
3 4:0.351223794938
3 5:0.925663197401
3 6:0.893044076141
4 5:0.703867249819
4 6:0.696430866777
5 6:0.175622160818
</hsp>