sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J02-A989-A961
X
>2J00-A1440-A326
X
>2J00-A989-A961
X
>3OHK-A1427-A1498
X
>1N32-A1440-A326
X
>2UUA-A1440-A326
X
>3F1E-A989-A961
X
</seq>
<hsp>
0 1:0.279838570027
0 2:0.103539263102
0 3:0.841460392356
0 4:0.367601408017
0 5:0.334243334326
0 6:0.384604747139
1 2:0.288666793206
1 3:0.733359579344
1 4:0.23347307341
1 5:0.266825619081
1 6:0.477983444018
2 3:0.902037484467
2 4:0.393860373102
2 5:0.356843789063
2 6:0.383040363894
3 4:0.713774424415
3 5:0.711004077424
3 6:1.0
4 5:0.115453308375
4 6:0.425656109492
5 6:0.381674885892
</hsp>