sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A95-A79
X
>3OHD-A272-A238
X
>3F1H-A2258-A973
X
>3F1F-A2258-A973
X
>3OHJ-A2104-A955
X
>3OHK-A2104-A955
X
>3OHZ-A2104-A955
X
</seq>
<hsp>
0 1:0.483085220113
0 2:0.774015192641
0 3:0.765687190792
0 4:0.677737698954
0 5:0.668962331827
0 6:0.735570768613
1 2:1.0
1 3:0.998491537969
1 4:0.904931578277
1 5:0.898858223437
1 6:0.921958158583
2 3:0.0235002881049
2 4:0.379740484355
2 5:0.433928422158
2 6:0.431274410171
3 4:0.383481049395
3 5:0.437594269753
3 6:0.439279319794
4 5:0.0762152752767
4 6:0.162039638978
5 6:0.148517674275
</hsp>