sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-51459-51419
X
>2QA4-01942-01971
X
>1Q81-A1943-A1972
X
>1Q86-A1943-A1972
X
>1KD1-A1943-A1972
X
>1K9M-A1943-A1972
X
>1K8A-A1943-A1972
X
</seq>
<hsp>
0 1:1.0
0 2:0.972574917854
0 3:0.988427179484
0 4:0.981910751609
0 5:0.981489356019
0 6:0.98849726239
1 2:0.0720621586836
1 3:0.0634181462235
1 4:0.0617406358304
1 5:0.0584737265386
1 6:0.0603071768176
2 3:0.0338604311693
2 4:0.0471975135951
2 5:0.0390868206673
2 6:0.0542961685696
3 4:0.0250932383955
3 5:0.0203165362872
3 6:0.0259241024492
4 5:0.0226259233449
4 6:0.0131474713963
5 6:0.0238339169583
</hsp>