sequences=18
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3SUX-X9-X37
X
>3U5B-21758-2974
X
>3CMA-0884-02320
X
>1VQN-0884-02320
X
>1VQO-0884-02320
X
>1VQK-0884-02320
X
>1VQL-0884-02320
X
>3CCM-0884-02320
X
>3CCQ-0884-02320
X
>1VQ8-0884-02320
X
>1VQ9-0884-02320
X
>3CCE-0884-02320
X
>3CCV-0884-02320
X
>1YHQ-0884-02320
X
>3CXC-0884-02320
X
>3I56-0884-02320
X
>1VQ7-0884-02320
X
>1VQ5-0884-02320
X
</seq>
<hsp>
0 1:0.999999424004
0 2:0.906072068122
0 3:0.893709674862
0 4:0.887852724637
0 5:0.885838231141
0 6:0.894284833297
0 7:0.897021597987
0 8:0.873811935276
0 9:0.895864306345
0 10:0.895169236473
0 11:0.887269384251
0 12:0.887328347046
0 13:0.882707043653
0 14:0.891034146956
0 15:0.859509045022
0 16:0.879299679004
0 17:0.886237290963
1 2:0.897585158692
1 3:0.887739082226
1 4:0.883062613447
1 5:0.888184237174
1 6:0.877925852473
1 7:0.881387866477
1 8:0.895163394068
1 9:0.890038585225
1 10:0.891989922527
1 11:0.893851895886
1 12:0.884606071752
1 13:0.882786416673
1 14:0.87851053897
1 15:0.906139643279
1 16:0.884308661733
1 17:0.882849697565
2 3:0.0572625070869
2 4:0.0838060447665
2 5:0.0632957824043
2 6:0.0702455281837
2 7:0.0565129139771
2 8:0.0675767190525
2 9:0.0437063418793
2 10:0.0392421875687
2 11:0.0505854433573
2 12:0.0593581233589
2 13:0.0755972161659
2 14:0.0829441949555
2 15:0.0967291831661
2 16:0.0684954124969
2 17:0.0659487355875
3 4:0.0335631290763
3 5:0.0215300291719
3 6:0.0271402042244
3 7:0.0280966062198
3 8:0.0476159586762
3 9:0.0261916528742
3 10:0.0392250034743
3 11:0.0590775127386
3 12:0.0396121838731
3 13:0.0540432647494
3 14:0.0888585815076
3 15:0.0873084482328
3 16:0.0530099692987
3 17:0.0666780195883
4 5:0.0320321340294
4 6:0.0327272446889
4 7:0.041999251406
4 8:0.0454902684077
4 9:0.0457504961647
4 10:0.0536813250259
4 11:0.071610824002
4 12:0.0454208782681
4 13:0.0536385014113
4 14:0.0945918182333
4 15:0.086722119933
4 16:0.0569276908184
4 17:0.0755685488281
5 6:0.0223028697376
5 7:0.0278429936133
5 8:0.0360497035493
5 9:0.0260837472528
5 10:0.0384559085111
5 11:0.0506572499696
5 12:0.0377493158804
5 13:0.044863843678
5 14:0.0831639070712
5 15:0.0769853848279
5 16:0.0411385279545
5 17:0.0585760342323
6 7:0.0227496262752
6 8:0.0528429482203
6 9:0.0318081661053
6 10:0.0468079561656
6 11:0.0568455042471
6 12:0.0458004078222
6 13:0.0496170371219
6 14:0.0850482306246
6 15:0.092551315237
6 16:0.0474619985474
6 17:0.0614506589158
7 8:0.0514396979016
7 9:0.0216838793601
7 10:0.0345541293576
7 11:0.0438659485954
7 12:0.0436010793767
7 13:0.0514759511499
7 14:0.0822750606119
7 15:0.0929575129459
7 16:0.0477658733574
7 17:0.057643467832
8 9:0.0428068115206
8 10:0.0376779362405
8 11:0.0503317667481
8 12:0.0339384914142
8 13:0.0452849790284
8 14:0.0768205956524
8 15:0.0549671334265
8 16:0.0392516014189
8 17:0.0574324344219
9 10:0.0209473486965
9 11:0.0363645206573
9 12:0.0372942417395
9 13:0.0456684828421
9 14:0.073867033119
9 15:0.0807876095065
9 16:0.0416748296444
9 17:0.0499113838507
10 11:0.0325249166662
10 12:0.0323313359566
10 13:0.0463373764541
10 14:0.0657418307073
10 15:0.0732181634595
10 16:0.0401267338653
10 17:0.0451012543023
11 12:0.0555119749013
11 13:0.0571494639208
11 14:0.0704441946204
11 15:0.0804650129148
11 16:0.044948380285
11 17:0.0448465806648
12 13:0.0307862177708
12 14:0.0594520775549
12 15:0.0614341562166
12 16:0.0303282506017
12 17:0.0441378829515
13 14:0.0473912350164
13 15:0.054560639677
13 16:0.0199371434559
13 17:0.0326722076767
14 15:0.0677267520994
14 16:0.0474206514192
14 17:0.0298807377157
15 16:0.0543275781078
15 17:0.0629885578521
16 17:0.0240212374494
</hsp>