sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1XMQ-A737-A269
X
>2VQE-A353-A27
X
>3GOG-A57-A36
X
>2UUB-A353-A27
X
>1XMQ-A353-A27
X
>3F1E-A350-A45
X
>3F1G-A350-A45
X
>1FJG-A350-A45
X
>2VQE-A350-A45
X
>3OI0-A350-A45
X
>2UUA-A350-A45
X
</seq>
<hsp>
0 1:0.721345853946
0 2:0.498988176653
0 3:0.729377511298
0 4:0.729018196959
0 5:0.848362772308
0 6:0.848583020518
0 7:0.836763193356
0 8:0.85023406402
0 9:0.832588443088
0 10:0.859621473839
1 2:0.56653231033
1 3:0.0332807793029
1 4:0.0282906861757
1 5:0.725664593324
1 6:0.723294956368
1 7:0.752787631445
1 8:0.744268799257
1 9:0.728837695653
1 10:0.744006569777
2 3:0.578067201681
2 4:0.580143163701
2 5:0.999199955515
2 6:0.998552466172
2 7:0.992625465476
2 8:0.994745473335
2 9:0.985787174742
2 10:0.999999006505
3 4:0.0155023327952
3 5:0.71111855831
3 6:0.708678732505
3 7:0.738454709576
3 8:0.73020924711
3 9:0.714830363526
3 10:0.729008280198
4 5:0.705780569049
4 6:0.70334133585
4 7:0.733416219314
4 8:0.725232890857
4 9:0.709711876391
4 10:0.724149255277
5 6:0.00680989248709
5 7:0.048905589988
5 8:0.0704187063394
5 9:0.0508788527491
5 10:0.0551268235071
6 7:0.0502194363361
6 8:0.0725849554553
6 9:0.0518679970623
6 10:0.0561515775459
7 8:0.0651789028301
7 9:0.0437797879361
7 10:0.0546392497673
8 9:0.0367418040604
8 10:0.0374749852545
9 10:0.0431118781043
</hsp>