sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGE-A1070-A1087
X
>2UXC-A1070-A1087
X
>2UUB-A1070-A1087
X
>1XMQ-A1065-A1082
X
>1N32-A1070-A1087
X
>1FJG-A1070-A1087
X
>2J00-A1070-A1087
X
>2VQF-A1070-A1087
X
>3F1E-A1070-A1087
X
</seq>
<hsp>
0 1:0.40967910392
0 2:0.476493715284
0 3:0.400898942053
0 4:0.445819880918
0 5:0.483665359281
0 6:0.241529014912
0 7:0.332133991031
0 8:0.640579222023
1 2:0.302154478885
1 3:0.298149510774
1 4:0.26796975131
1 5:0.210913287911
1 6:0.425940004589
1 7:0.286920491118
1 8:0.971301518695
2 3:0.238073665849
2 4:0.28981132962
2 5:0.169287713911
2 6:0.385533806258
2 7:0.199602464655
2 8:0.934999537964
3 4:0.285074756826
3 5:0.227509459843
3 6:0.37371149906
3 7:0.233393258674
3 8:0.854973283848
4 5:0.198528067311
4 6:0.463154799737
4 7:0.211838107127
4 8:0.967148550567
5 6:0.464151029401
5 7:0.217594749244
5 8:1.0
6 7:0.324693276465
6 8:0.67503633655
7 8:0.819778559833
</hsp>