sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1FFK-0653-0219
X
>3I56-0654-0220
X
>1K9M-A654-A220
X
>3CCE-0654-0220
X
>3CCS-0654-0220
X
>3CCL-0654-0220
X
>1Q86-A654-A220
X
>3CMA-0654-0220
X
</seq>
<hsp>
0 1:0.92509705465
0 2:0.633478769753
0 3:0.895221611251
0 4:0.999989140307
0 5:0.544784023176
0 6:0.803809529327
0 7:0.666436880553
1 2:0.936332917661
1 3:0.552206577819
1 4:0.560070223708
1 5:0.804162747606
1 6:0.884280605362
1 7:0.699650244296
2 3:0.84006342386
2 4:0.857118989667
2 5:0.659819301527
2 6:0.375135123386
2 7:0.409106014119
3 4:0.527194362045
3 5:0.707321896659
3 6:0.898978533174
3 7:0.536606395004
4 5:0.895316838968
4 6:0.894765822968
4 7:0.639265888928
5 6:0.665097292254
5 7:0.604523963896
6 7:0.489228807927
</hsp>