sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UXC-A1156-A1134
X
>3G9C-Q57-Q41
X
>3G9C-R57-R41
X
>2NZ4-R57-R41
X
>3G9C-S57-S41
X
>3L3C-R57-R41
X
>3U5F-61405-61382
X
>2NZ4-Q57-Q41
X
</seq>
<hsp>
0 1:0.811636718996
0 2:0.733413045254
0 3:0.82231826775
0 4:0.722104741947
0 5:1.0
0 6:0.222802759467
0 7:0.873752065621
1 2:0.258148007823
1 3:0.161009836377
1 4:0.259562394658
1 5:0.251739849611
1 6:0.758770329455
1 7:0.152773496906
2 3:0.261124581394
2 4:0.180545672648
2 5:0.412533843664
2 6:0.654954546981
2 7:0.276259066142
3 4:0.325916785735
3 5:0.31518129365
3 6:0.751656570076
3 7:0.133794322468
4 5:0.350941967235
4 6:0.633643064194
4 7:0.291410866209
5 6:0.917719979492
5 7:0.214598453711
6 7:0.794644866492
</hsp>