sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q86-A1166-A1150
X
>1Q82-A1166-A1150
X
>1QVG-01166-01150
X
>1N8R-A1166-A1150
X
>1YJW-01166-01150
X
>1YJN-01166-01150
X
>1VQN-01166-01150
X
>3U5H-5670-5734
X
</seq>
<hsp>
0 1:0.0260833714769
0 2:0.032424304211
0 3:0.0266072232161
0 4:0.0723275965877
0 5:0.0616764783543
0 6:0.0564826644556
0 7:0.987024866424
1 2:0.0195287796068
1 3:0.0141953305049
1 4:0.0874792322148
1 5:0.0702891117355
1 6:0.0557729506062
1 7:0.997439071729
2 3:0.0276073510484
2 4:0.0880973030889
2 5:0.064073215166
2 6:0.0627285537953
2 7:0.999610400107
3 4:0.0836607699984
3 5:0.0694398703286
3 6:0.0541805685476
3 7:0.991862370811
4 5:0.102018621591
4 6:0.0807352712736
4 7:0.943003774504
5 6:0.102474995248
5 7:0.999999582843
6 7:0.971009800642
</hsp>