sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1MJI-D19-C20
X
>1XMQ-A1479-A759
X
>3KNH-A1476-A750
X
>3OHD-A1485-A759
X
>3OHD-A511-A513
X
>3OI0-A511-A513
X
>3OHY-A511-A513
X
</seq>
<hsp>
0 1:0.962687902517
0 2:0.996029597146
0 3:1.0
0 4:0.496398500549
0 5:0.492466227715
0 6:0.494304775789
1 2:0.0762901448789
1 3:0.0797971003135
1 4:0.887555158965
1 5:0.884489909274
1 6:0.883199153094
2 3:0.0423984111906
2 4:0.879655293395
2 5:0.878787506559
2 6:0.87755096053
3 4:0.900095527139
3 5:0.898167981745
3 6:0.896940123716
4 5:0.0486484100123
4 6:0.0461661685955
5 6:0.00625454010471
</hsp>